Current Bioinformatics

Introduction of Advanced Methods for Structure-based Drug Discovery

Volume: 16   Issue: 3
Pp: 351-363
Bilal Shaker, Kha Mong Tran, Chanjin Jung and Dokyun Na*
DOI: 10.2174/1574893615999200703113200

MK-FSVM-SVDD: A Multiple Kernel-based Fuzzy SVM Model for Predicting DNA-binding Proteins via Support Vector Data Description

Volume: 16   Issue: 2
Pp: 274-283
Yi Zou, Hongjie Wu, Xiaoyi Guo, Li Peng*, Yijie Ding*, Jijun Tang and Fei Guo*
DOI: 10.2174/1574893615999200607173829

Bayesian Functional Mixed-effects Models with Grouped Smoothness for Analyzing Time-course Gene Expression Data

Volume: 16   Issue: 1
Pp: 2-12
Shangyuan Ye, Ye Liang and Bo Zhang*
DOI: 10.2174/1574893615999200520082636

MRMD2.0: A Python Tool for Machine Learning with Feature Ranking and Reduction promotion: free to download

Volume: 15   Issue: 10
Pp: 1213-1221
Shida He, Fei Guo, Quan Zou* and HuiDing
DOI: 10.2174/1574893615999200503030350

A Mini-review of Computational Approaches to Predict Functions and Findings of Novel Micro Peptides

Volume: 15   Issue: 9
Pp: 1027-1035
Mohsin Ali Nasir, Samia Nawaz and Jian Huang*
DOI: 10.2174/1574893615999200811130522

Comprehensive Analysis of Features and Annotations of Pathway Databases

Volume: 15   Issue: 8
Pp: 803-820
Ali Ghulam, Xiujuan Lei*, Min Guo and Chen Bian
DOI: 10.2174/1574893615999200413123352

A Survey of Metrics Measuring Difference for Rooted Phylogenetic Trees

Volume: 15   Issue: 7
Pp: 697-702
Juan Wang, Xinyue Qi, Bo Cui and Maozu Guo*
DOI: 10.2174/1574893614666191017130217

An Information Gain-based Method for Evaluating the Classification Power of Features Towards Identifying Enhancers

Volume: 15   Issue: 6
Pp: 574-580
Tianjiao Zhang, Rongjie Wang, Qinghua Jiang* and Yadong Wang*
DOI: 10.2174/1574893614666191120141032

A Review of Pathway Databases and Related Methods Analysis

Volume: 15   Issue: 5
Pp: 379-395
Ali Ghulam, Xiujuan Lei*, Min Guo and Chen Bian
DOI: 10.2174/1574893614666191018162505

Analysis and Comparison of RNA Pseudouridine Site Prediction Tools

Volume: 15   Issue: 4
Pp: 279-286
Wei Chen* and Kewei Liu
DOI: 10.2174/1574893614666191018171521

Current State of the Art for Survival Prediction in Cancer Using Data Mining Techniques

Volume: 15   Issue: 3
Pp: 174-186
M.N. Doja, Ishleen Kaur* and Tanvir Ahmad
DOI: 10.2174/1574893614666190902152142

Protein Secondary Structure Prediction: A Review of Progress and Directions open access plus

Volume: 15   Issue: 2
Pp: 90-107
Tomasz Smolarczyk, Irena Roterman-Konieczna and Katarzyna Stapor*
DOI: 10.2174/1574893614666191017104639

Computational Approaches for Transcriptome Assembly Based on Sequencing Technologies

Volume: 15   Issue: 1
Pp: 2-16
Yuwen Luo, Xingyu Liao, Fang-Xiang Wu and Jianxin Wang*
DOI: 10.2174/1574893614666190410155603

Predicting Drug Side Effects with Compact Integration of Heterogeneous Networks

Volume: 14   Issue: 8
Pp: 709-720
Xian Zhao, Lei Chen*, Zi-Han Guo and Tao Liu
DOI: 10.2174/1574893614666190220114644

PlncRNADB: A Repository of Plant lncRNAs and lncRNA-RBP Protein Interactions

Volume: 14   Issue: 7
Pp: 621-627
Youhuang Bai, Xiaozhuan Dai, Tiantian Ye, Peijing Zhang, Xu Yan, Xiaonan Gong, Siliang Liang and Ming Chen*
DOI: 10.2174/1574893614666190131161002

RMDB: An Integrated Database of Single-cytosine-resolution DNA Methylation in Oryza Sativa

Volume: 14   Issue: 6
Pp: 524-531
Tiansheng Zhu, Jihong Guan, Hui Liu and Shuigeng Zhou*
DOI: 10.2174/1574893614666190211161717

Advances in the Prediction of Protein Subcellular Locations with Machine Learning

Volume: 14   Issue: 5
Pp: 406-421
Ting-He Zhang and Shao-Wu Zhang*
DOI: 10.2174/1574893614666181217145156

Analysis of Single-Cell RNA-seq Data by Clustering Approaches

Volume: 14   Issue: 4
Pp: 314-322
Xiaoshu Zhu, Hong-Dong Li, Lilu Guo, Fang-Xiang Wu and Jianxin Wang*
DOI: 10.2174/1574893614666181120095038

Protein Inter-Residue Contacts Prediction: Methods, Performances and Applications

Volume: 14   Issue: 3
Pp: 178-189
Xiaoyang Jing, Qimin Dong, Ruqian Lu and Qiwen Dong*
DOI: 10.2174/1574893613666181109130430

The Influence of Memory-Aware Computation on Distributed BLAST

Volume: 14   Issue: 2
Pp: 157-163
Majid Hajibaba, Mohsen Sharifi and Saeid Gorgin*
DOI: 10.2174/1574893613666180601080811