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Protein & Peptide Letters

Editor-in-Chief

ISSN (Print): 0929-8665
ISSN (Online): 1875-5305

General Research Article

A Comparison Between Cell, Protein and Peptide-Based Approaches for Selection of Nanobodies Against CD44 from a Synthetic Library

Author(s): Soudabeh Kavousipour, Pooneh Mokarram*, Seyed Latif Mousavi Gargari, Zohreh Mostafavi-Pour, Mehdi Barazesh, Amin Ramezani, Hassan Ashktorab, Shiva Mohammadi and Saeid Ghavami

Volume 25, Issue 6, 2018

Page: [580 - 588] Pages: 9

DOI: 10.2174/0929866525666180530122159

Price: $65

Abstract

Background: The hyaluronic acid receptor CD44, is a cancer stem cell biomarker, playing important roles in cell adhesion, tumor progression and drug-resistance. Therefore, CD44 is a potential target for cancer treatment and its blockade could result in multi-factorial therapeutic effects.

Methods: Nanobodies against CD44 were isolated from a synthetic library with a diversity of 5×1011 CFU/ml using the phage display technique. Three approaches were used for isolation of nanobodies fragments including peptide-, protein- and cell-based panning.

Results: Nanobodies from cell-based panning displayed more specificity compared to protein or peptide-based panning. Our results show that cell-based panning is the most efficient method for isolation of a specific single domain antibody fragment to CD44 from a synthetic phage displayed library.

Conclusion: The isolated nanobodies could successfully recognize and bind cells that express the CD44 surface antigen.

Keywords: Cell-based panning, CD44, Nanobody, Phage display, VHH, Synthetic library.

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