Abstract
The quantitative structure-activity relationship (QSAR) of a set of 29 agonists for tyramine (TA) receptor responsible for the inhibition of sex-pheromone production in Plodia interpunctella, was analyzed using comparative receptor surface analysis (CoRSA). Using the common steric and electrostatic features of the most active members of a series of compounds, CoRSA generated a virtual receptor model, represented as points on a surface complementary to the van der Waals or Wyvill steric surface of the aligned compounds. Three-dimensional energetics descriptors were calculated from receptor surface model (RSM) / ligand interaction and these three-dimensional descriptors were used in genetic partial least squares data analysis to generate a QSAR model, giving a 3D QSAR with r2=0.969 for calibration and CV- r2=0.635 for the leave-oneout cross validation.
Keywords: hts, high throughput screening, micro-arrayed compound screening, hdac
Combinatorial Chemistry & High Throughput Screening
Title: Comparative Receptor Surface Analysis of Agonists for Tyramine Receptor which Inhibit Sex-Pheromone Production in Plodia interpunctella
Volume: 7 Issue: 2
Author(s): A. Hirashima, T. Eiraku, E. Kuwano and M. Eto
Affiliation:
Keywords: hts, high throughput screening, micro-arrayed compound screening, hdac
Abstract: The quantitative structure-activity relationship (QSAR) of a set of 29 agonists for tyramine (TA) receptor responsible for the inhibition of sex-pheromone production in Plodia interpunctella, was analyzed using comparative receptor surface analysis (CoRSA). Using the common steric and electrostatic features of the most active members of a series of compounds, CoRSA generated a virtual receptor model, represented as points on a surface complementary to the van der Waals or Wyvill steric surface of the aligned compounds. Three-dimensional energetics descriptors were calculated from receptor surface model (RSM) / ligand interaction and these three-dimensional descriptors were used in genetic partial least squares data analysis to generate a QSAR model, giving a 3D QSAR with r2=0.969 for calibration and CV- r2=0.635 for the leave-oneout cross validation.
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Hirashima A., Eiraku T., Kuwano E. and Eto M., Comparative Receptor Surface Analysis of Agonists for Tyramine Receptor which Inhibit Sex-Pheromone Production in Plodia interpunctella, Combinatorial Chemistry & High Throughput Screening 2004; 7 (2) . https://dx.doi.org/10.2174/138620704773120775
DOI https://dx.doi.org/10.2174/138620704773120775 |
Print ISSN 1386-2073 |
Publisher Name Bentham Science Publisher |
Online ISSN 1875-5402 |
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