The Recognition of 27-Class Protein Folds: Approached by Increment of Diversity Based on Multi-Characteristic Parameters

Author(s): Huaiguang Zhang, Xiuzhen Hu, Qianzhong Li

Journal Name: Protein & Peptide Letters

Volume 16 , Issue 9 , 2009


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Abstract:

Based on the primary sequence, by selecting the pseudo amino acid composition, position weight matrix score, the predicted secondary structure and the second neighbor dipeptide composition as characteristic parameters, an approach of diversity increment for predicting 27-class protein folds is proposed. Overall recognition accuracy reaches 61.10% in the independent testing.

Keywords: Increment of diversity, pseudo amino acid composition, position weight matrix, protein fold

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Article Details

VOLUME: 16
ISSUE: 9
Year: 2009
Page: [1112 - 1119]
Pages: 8
DOI: 10.2174/092986609789055278
Price: $65

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