Current Bioinformatics

Editor-in-Chief

Quan Zou
University of Electronic Science and Technology of China
Chengdu
(China)

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Articles Ahead of Print

Bioluminescent proteins prediction with voting strategy.

Volume:15
Shulin Zhao, Ying Ju, Xiucai Ye, Jun Zhang* and Shuguang Han

An Algorithm to Improve the Speed of Semi- and Non-Specific Enzyme Searches in Proteomics

Volume:15
Zach Rolfs, Robert J. Millikin and Lloyd M. Smith*

Comprehensive analysis reveals GPRIN1 is a potential biomarker for non-small cell lung cancer

Volume:15
Jian Li*, Zheng Gong, Haicheng Jiang, Jie Gao, Jianwei Liang, Peng Chang and Yulong Hou

Rosetta and the Journey to Predict Proteins’ Structures, 20 Years On

Volume:15
Jad Abbass* and Jean-Christophe Nebel

GASPIDs versus Non-GASPIDs - Differentiation Based on Machine Learning Approach

Volume:15
Fawad Ahmad, Saima Ikram, Jamshaid Ahmad*, Waseem Ullah, Fahad Hassan, Saeed Ullah Khattak and Irshad Ur Rehman

A Review of Protein Inter-Residue Distance Prediction

Volume:15
He Huang and Xinqi Gong*

Sequence-Based Identification of Allergen Proteins Developed by Integration of PseAAC and Statistical Moments via 5-Step Rule

Volume:15
Yaser Daanial Khan*, Ebraheem Alzahrani, Wajdi Alghamdi and Malik Zaka Ullah

Multi-level Parallelization of Genotype Imputation on Supercomputers

Volume:15
Weiwen Zhang*, Long Wang, Theint Theint Aye, Juniarto Samsudin and Yongqing Zhu

An Overview of Abdominal Multi-Organ Segmentation

Volume:15
Qiang Li, Hong Song*, Lei Chen, Xianqi Meng, Jian Yang and Le Zhang

Integrative analysis of miRNA-mediated competing endogenous RNA network reveals the lncRNAs-mRNAs interaction in glioblastoma stem cell differentiation

Volume:15
Zhenyu Zhao, Cheng Zhang, Mi Li*, Xinguang Yu, Hailong Liu, Jian Wang, Qi Chen, Shaopin Shen and Jingjing Jiang

Identification of Glioma Specific Genes as Diagnostic and Prognostic Markers for Glioma

Volume:15
Ming Tu, Ling Ye, ShaoBo Hu, Wei Wang, Penglei Zhu, XiangHe Lu and WeiMing Zheng*

Detecting TYMS tandem repeat polymorphism by the PSSD method based on next generation sequecing

Volume:15
Binsheng He, Jialiang Yang, Geng Tian, Pingping Bing and Jidong Lang*

MRMD2.0: A Python tool for machine learning features ranking and reduction

Volume:15
Shida He, Fei Guo, Quan Zou* and Hui Ding

A review on the methods of peptide-MHC binding prediction

Volume:15
Yang Liu, Xia-hui Ouyang, Zhi-Xiong Xiao, Le Zhang and Yang Cao*

Stochastic Neighbor Embedding Algorithm and Its Application in Molecular Biological Data

Volume:15
Pan Wang, Guiyang Zhang, You Li, Ammar Oad and Guohua Huang*

Quantum Patterns of Genome Size Variation in Angiosperms

Volume:15
Liaofu Luo and Lirong Zhang*

Comprehensive Analysis of Features and Annotations of Pathway Databases

Volume:15
Ali Ghulam, Xiujuan Lei*, Min Guo and Chen Bian

Withdrawal Notice: Clinical Pathways Optimization from Decision Rules Based on Fusion Stream Mining and Fuzzy Unordered Rule Induction Strategy in Diabetes Treatment

Volume:14
Simon Fong, Dana Wang, Jinan Fiaidhi, Sabah Mohammed, Libo Chen* and Li Ling

A Novel Method for Microsatellite Instability Detection by Liquid Biopsy Based on Next-Generation Sequencing

Volume:15
Zheng Jiang, Hui Liu , Siwen Zhang , Jia Liu , Weitao Wang, Guoliang Zang, Bo Meng , Huixin Lin, Jichuan Quan , Shuangmei Zou , Dawei Yuan*, Xishan Wang, Geng Tian and Jidong Lang

Artificial Neural Network Models for Coronary Artery Disease

Volume:15
Elham Shamsara, Sara Saffar Soflaei, Mohammad Tajfard, Ivan Yamshchikov, Habibollah Esmaili, Maryam Saberi-Karimian, Hamideh Ghazizadeh, Seyed Reza Mirhafez, Zahra Farjami, Gordon A. Ferns and Majid Ghayour-Mobarhan*

Identification of Most Relevant Features for Classification of Francisella tularensis using Machine Learning

Volume:15
Fareed Ahmad*, Amjad Farooq, Muhammad Usman Ghani Khan, Muhammad Zubair Shabbir, Masood Rabbani and Irshad Hussain

Classification of Chromosomal DNA Sequences Using Hybrid Deep Learning Architectures

Volume:15
Zhihua Du, Xiangdong Xiao and Vladimir N. Uversky*

Identifying Breast Cancer-induced Gene Perturbations and its Application in Guiding Drug Repurposing

Volume:15
Jujuan Zhuang, Shuang Dai, Lijun Zhang, Pan Gao, Yingmin Han, Geng Tian, Na Yan, Min Tang and Ling Kui*

Identification of Genomic Islands in Synechococcus sp. WH8102 Using Genomic Barcode and Whole-Genome Microarray Analysis

Volume:15
Jiahui Pan, Xizi Luo, Tong Shao, Chaoying Li, Tingting Zhao, Shiwei Zhang, Fengfeng Zhou and Guoqing Wang*

Cancer Diagnosis and Disease Gene Identification via Statistical Machine Learning

Volume:15
Liuyuan Chen, Juntao Li* and Mingming Chang

Screening of SLE-Susceptible SNPs in One Chinese Family with Systemic Lupus Erythematosus

Volume:15
Juan Luo*, Yanming Meng, Jianzhao Zhai, Ying Zhu, Yizhou Li and Yongkang Wu

Exploiting XG Boost For Predicting Enhancer-Promoter Interactions

Volume:15
Xiaojuan Yu, Jianguo Zhou, Mingming Zhao , Chao Yi, Qing Duan, Wei Zhou* and Jin Li

A Deep Convolutional Neural Network to Improve the Prediction of Protein Secondary Structure

Volume:15
Lin Guo, Qian Jiang, Xin Jin*, Lin Liu, Wei Zhou, Shaowen Yao, Min Wu and Yun Wang

Aggregation Prone Regions in Antibody Sequences Raised Against Vibrio cholerae: A Bioinformatic Approach

Volume:15
Zakia Akter, Anamul Haque, Md. Sabir Hossain, Firoz Ahmed and Md Asiful Islam*

Co-expression Network Analysis Revealing the Potential Regulatory Roles of lncRNAs in Atrial Fibrillation

Volume:14
Lishui Shen, Guilin Shen, Xiaoli Lu, Guomin Ding and Xiaofeng Hu*

A Drug Target Interaction Prediction based on LINE-RF Learning

Volume:15
Jihong Wang*, Yue Shi, Xiaodan Wang and Huiyou Chang

An Analysis Model of Protein Mass Spectrometry Data and Its Application

Volume:14
Pingan He*, Longao Hou, Hong Tao, Qi Dai and Yuhua Yao

Model with the GBDT for Colorectal Adenoma Risk Diagnosis

Volume:14
Junbo Gao*, Lifeng Zhang, Gaiqing Yu, Guoqiang Qu, Yanfeng Li and Xuebing Yang

Research on Psychological Scales Based on the Multitheory Fusion

Volume:15
Guangdi Liu, Yu Chen Li, Yue Wang, Jing Xiang Liu, Yong Sheng Sang, Wei Zhang and Le Zhang *

A Survey of Metrics Measuring Difference for Rooted Phylogenetic Trees

Volume:14
Juan Wang, Xinyue Qi, Bo Cui and Maozu Guo*

Lung Cancer Classification and Gene Selection by Combining Affinity Propagation Clustering and Sparse Group Lasso

Volume:14
Juntao Li*, Mingming Chang, Qinghui Gao, Xuekun Song and Zhiyu Gao

Complex Networks, Gene Expression and Cancer Complexity: A Brief Review of Methodology and Applications

Volume:14
A. C. Iliopoulos, G. Beis, P. Apostolou and I. Papasotiriou*

Docking Techniques in Toxicology: An Overview

Volume:14
Meenakshi Gupta, Ruchika Sharma and Anoop Kumar*

Analysis of the Epigenetic Signature of Cell Reprogramming by Computational DNA Methylation Profiles

Volume:14
Yongchun Zuo*, Mingmin Song, Hanshuang Li, Xing Chen, Pengbo Cao, Lei Zheng and Guifang Cao

Identification of Cancerlectins by Using Cascade Linear Discriminant Analysis and Optimal g-gap Tripeptide Composition

Volume:14
Liangwei Yang , Hui Gao *, Keyu Wu, Haotian Zhang , Changyu Li and Lixia Tang

Natural Scene Nutrition Information Acquisition and Analysis Based on Deep Learning

Volume:14
Tianyue Zhang, Xu Wei, Zhi Li, Fangzhe Shi, Zhiqiang Xia, Mengru Lian, Ling Chen and Hao Zhang*