Abstract
In this paper we propose a matrix depiction and two new invariants of DNA sequences. This approach is illustrated on the primate mitochondrial DNA sequences for 11 different species and 80 different H5N1 avian influenza virus DNA sequences. We also construct the dendrogram tree for them. These phylogenies obtained are generally consistent with evolutionary trees constructed in previous studies.
Keywords: Invariants, matrix depiction, similarities matrix, H5N1, phylogenetic tree, H5N1 avian influenza virus, Macaca sylvanus appears, Dendogram, H5NI, H5NI Strain, AIVs evolution process
Combinatorial Chemistry & High Throughput Screening
Title: New Invariant of DNA Sequences Based on a New Matrix Representation
Volume: 14 Issue: 1
Author(s): Yanqiu Liu and Yusen Zhang
Affiliation:
Keywords: Invariants, matrix depiction, similarities matrix, H5N1, phylogenetic tree, H5N1 avian influenza virus, Macaca sylvanus appears, Dendogram, H5NI, H5NI Strain, AIVs evolution process
Abstract: In this paper we propose a matrix depiction and two new invariants of DNA sequences. This approach is illustrated on the primate mitochondrial DNA sequences for 11 different species and 80 different H5N1 avian influenza virus DNA sequences. We also construct the dendrogram tree for them. These phylogenies obtained are generally consistent with evolutionary trees constructed in previous studies.
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Cite this article as:
Liu Yanqiu and Zhang Yusen, New Invariant of DNA Sequences Based on a New Matrix Representation, Combinatorial Chemistry & High Throughput Screening 2011; 14 (1) . https://dx.doi.org/10.2174/1386207311107010061
DOI https://dx.doi.org/10.2174/1386207311107010061 |
Print ISSN 1386-2073 |
Publisher Name Bentham Science Publisher |
Online ISSN 1875-5402 |
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