Abstract
A new modification of Monte-Carlo algorithm was suggested for the simulation of hierarchical protein folding. When applied to 2D lattice model of 12-member peptide this method allows observing complex kinetic folding behavior with the formation of clustered intermediates.
Keywords: HIERARCHICAL PROTEIN FOLDING, CLUSTERING MONTE-CARLO ALGORITHM, protein folding, Monte-Carlo simulations, lattice models, hierarchical cluster formation
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